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C. Structure and Properties of Matter · Structure and Properties of Matter

Spectroscopy, MRI and Other Technologies: Benefits, Costs and Canadian Contributions

C1.1 C3.5 A1.9 A2.1 A2.2About 75 minutes
Learning goals
  • I can explain how spectroscopy, MRI, X-ray crystallography, lasers and nuclear energy depend on atomic and molecular structure.
  • I can assess the benefits and costs of these technologies to society.
  • I can describe contributions of Canadian scientists to knowledge of the structure and properties of matter.
  • I can identify careers that use these technologies.

Words to know

spectroscopy
The study of how matter absorbs or emits electromagnetic radiation, used to identify substances.
infrared (IR) spectroscopy
A technique that identifies bonds and functional groups from the IR wavelengths they absorb.
magnetic resonance imaging (MRI)
Medical imaging based on the response of hydrogen nuclei to a strong magnetic field and radio waves.
mass spectrometry
A technique that separates ions by mass-to-charge ratio.
X-ray crystallography
A technique that finds atomic positions from the diffraction of X-rays by a crystal.
ionizing radiation
Radiation energetic enough to remove electrons from atoms, such as X-rays and gamma rays.

From theory to the hospital

Everything in this unit so far may seem abstract: orbitals, spins, energy levels. Yet the same ideas run machines that diagnose disease, catch impaired drivers, analyse drinking water and study distant stars. In this lesson you will connect the theory to real technologies, weigh their benefits and costs to society, and meet some of the Canadians who helped build the science.

Spectroscopy: reading the light

Spectroscopy is the study of how matter absorbs or emits electromagnetic radiation. Because energy levels are quantized, every element and molecule has its own fingerprint.

  • Atomic absorption and emission spectroscopy (from the Bohr model and electron transitions): labs measure metals such as lead in drinking water or in children's toys by how strongly a sample absorbs the element's particular wavelengths. Flame colours and fireworks use emission. Astronomers find the composition and temperature of stars from their spectra.
  • Infrared (IR) spectroscopy (from molecular vibrations): bonds stretch and bend like springs, and each type absorbs IR light of particular energies. An O–H bond absorbs around 3200 to 3600 cm⁻¹, C–H around 2850 to 3000 cm⁻¹, and C=O around 1700 cm⁻¹. Chemists use IR to identify functional groups (very useful in the Organic Chemistry unit), forensic labs use it to identify drugs and fibres, and some evidential breath testers measure ethanol by its IR absorption. Carbon dioxide and water vapour absorb IR from Earth's surface, which is the basis of the greenhouse effect.
  • Mass spectrometry sorts ions by mass-to-charge ratio. It measures isotope abundances (as in Grade 11), detects banned substances in athletes, and identifies pollutants.
  • X-ray crystallography shines X-rays through crystals. The diffraction pattern reveals where the atoms are. Rosalind Franklin's X-ray images were key evidence for the double helix of DNA, and Dorothy Hodgkin used the method to find the structures of penicillin, vitamin B₁₂ and insulin.
4000300020001000wavenumber (cm⁻¹) ← higher energy% light transmittedO–H (broad)C–HC–O
A simplified sketch of the infrared spectrum of ethanol (not real data). Each kind of bond absorbs infrared light at its own characteristic wavenumbers, so the dips reveal which bonds, and therefore which functional groups, a molecule contains.

Magnetic resonance imaging (MRI)

Protons have spin (like electrons), which makes hydrogen nuclei behave like tiny magnets. In an MRI scanner:

  1. A very strong magnetic field (commonly 1.5 or 3 tesla, tens of thousands of times Earth's field) lines up the hydrogen nuclei in the water and fat of the body.
  2. Pulses of radio waves at just the right frequency tip the nuclei out of line (a quantized energy absorption, like an electron absorbing a photon).
  3. As the nuclei relax back, they emit radio signals. Different tissues relax at different rates, so a computer can build detailed images of soft tissues such as the brain, spinal cord, joints and organs.

The magnets in most MRI scanners are superconducting coils cooled with liquid helium to about −269 °C (see the next lesson).

Benefits: MRI uses no ionizing radiation (unlike X-rays and CT scans) and shows soft tissue in great detail. Costs and issues: scanners are expensive to buy and run, so wait times for non-urgent scans can be long; patients with some metal implants or devices cannot be scanned; the scanners need helium, a non-renewable resource; and the strong magnet means that metal objects must be kept out of the room for safety.

The related technique, NMR spectroscopy, uses the same physics to work out the structures of molecules and is one of the most important tools of modern chemistry.

1. No field:spins point every way2. Strong magnet:spins line up with fieldB3. Radio pulse:spins tip, then relax andsend back radio signals
How MRI works (simplified). Hydrogen nuclei in water and fat act like tiny magnets. A strong magnetic field lines them up; a radio pulse tips them; as they relax they give off radio signals that differ between tissues, and a computer turns those signals into an image.

Lasers and nuclear energy

Lasers depend on electrons in excited states being stimulated to drop to lower levels all together, giving light of one wavelength travelling in step. Lasers read barcodes, carry internet data along fibre-optic cables, cut metal and perform eye surgery.

Nuclear energy comes from the structure of the nucleus that Rutherford discovered. Ontario generates a large share of its electricity in CANDU nuclear reactors, which were designed in Canada. The benefit is electricity without greenhouse-gas emissions during operation; the challenges include the long-term storage of radioactive waste and the cost of building and refurbishing plants.

Canadian contributions

Canadian scientists have made important contributions to the science in this unit:

  • Ernest Rutherford did his Nobel-winning research on radioactivity at McGill University (1898 to 1907). Harriet Brooks, who worked with him there, is often described as Canada's first female nuclear physicist; her research helped show that radioactive elements give off a radioactive gas (now known to be an isotope of radon).
  • Gerhard Herzberg, who worked at the University of Saskatchewan and later at the National Research Council in Ottawa, won the 1971 Nobel Prize in Chemistry for his contributions to knowledge of the electronic structure and geometry of molecules, especially free radicals, using spectroscopy.
  • Ronald Gillespie of McMaster University developed VSEPR theory with Ronald Nyholm (1957), the theory you used to predict molecular shapes.
  • Richard Bader, also at McMaster, developed the quantum theory of atoms in molecules, a way of identifying atoms and bonds from the electron density calculated by quantum mechanics.
  • John Polanyi of the University of Toronto shared the 1986 Nobel Prize in Chemistry (with Dudley Herschbach and Yuan T. Lee) for work on the dynamics of chemical reactions; his study of the infrared light given off by newly formed molecules contributed to the development of chemical lasers.
  • Bertram Brockhouse, who did his prize-winning research at the Chalk River Laboratories in Ontario and later taught at McMaster, shared the 1994 Nobel Prize in Physics (with Clifford Shull) for developing neutron-scattering techniques for studying solids; Brockhouse's part, neutron spectroscopy, shows how the atoms in a solid move and vibrate.
  • Donna Strickland of the University of Waterloo shared half of the 2018 Nobel Prize in Physics with Gérard Mourou for a method of making extremely short, intense laser pulses, now used in eye surgery and precision machining. (The other half went to Arthur Ashkin for separate work on optical tweezers.)
  • The Canadian Light Source in Saskatoon is a national synchrotron facility where researchers use intense X-ray and infrared light to study the structure of materials, from new batteries to proteins.
1898–1907Rutherford andBrooks at McGill1957Gillespie:VSEPR1971Herzberg: Nobel,molecular spectra1986Polanyi: Nobel,reaction dynamics1994Brockhouse: Nobel,neutron scattering2018Strickland:Nobel, lasers(Bader's quantum theory of atoms in molecules developed at McMaster from the 1970s on)
Some Canadian contributions to understanding the structure and properties of matter (timeline not to scale).

Careers

People who work with these technologies include analytical chemists, MRI and medical radiation technologists, materials scientists, forensic scientists, environmental testing technicians and research scientists. Many start with a university degree in chemistry, physics, biochemistry or engineering, or a college program in medical radiation or laboratory technology.

Worked example

Example 1: Identifying a functional group by IR

A colourless liquid's IR spectrum shows a strong, sharp absorption near 1715 cm⁻¹ and C–H absorptions near 2950 cm⁻¹, but no broad absorption between 3200 and 3600 cm⁻¹. Is the liquid more likely to be propanone (CH₃COCH₃) or propan-2-ol (CH₃CHOHCH₃)?

  1. A broad band from 3200 to 3600 cm⁻¹ would indicate an O–H group; there is none, so it is not an alcohol.
  2. A strong band near 1715 cm⁻¹ indicates a C=O group.
  3. Propanone has a C=O and no O–H.

Propanone.

Worked example

Example 2: Weighing benefits and costs

A hospital must choose between a CT scanner (X-rays) and an MRI scanner for imaging knee ligaments. Give one scientific advantage of each and one issue to consider.

  1. MRI: excellent contrast for soft tissues such as ligaments and cartilage, and no ionizing radiation.
  2. CT: faster and cheaper per scan, and better for bone and for emergencies; but it uses ionizing X-rays.
  3. Issues: MRI's purchase and running costs (including helium), longer scan times and the need to screen patients for metal implants; CT's radiation dose.

For ligaments, MRI is usually preferred because of its soft-tissue contrast and lack of ionizing radiation, but cost and access must be weighed.

Worked example

Example 3: Spectroscopy in the environment

An environmental lab uses atomic absorption spectroscopy to test a school's tap water for lead. Explain, in terms of energy levels, why the instrument shines light of a particular wavelength through the vaporized sample.

  1. Lead atoms absorb only photons whose energy matches the difference between two of their electron energy levels.
  2. The instrument uses light of exactly a wavelength that lead absorbs.
  3. The more lead atoms in the sample, the more of that light is absorbed, so the absorbance tells the concentration.

Because only lead atoms absorb that wavelength; the amount absorbed is proportional to the lead concentration.

Just for fun

MRI machines are famously loud, with bangs and buzzes as the magnetic field gradients switch on and off. Many hospitals give patients earplugs or headphones, which may make MRI the only medical test that comes with a soundtrack.

Hands-on activity

Technology report card

Choose one technology from this lesson (MRI, IR spectroscopy, mass spectrometry, X-ray crystallography, lasers, atomic absorption spectroscopy or nuclear power).

You need: a computer or library access, and paper or a document.

  1. Find two reliable sources, such as a Canadian government, university, hospital or science-museum website, or a textbook. Note who wrote each one, when, and why you think it is reliable.
  2. Write a one-page "report card" with these sections: How it works (link to one idea from this unit: energy levels, spin, bond vibrations, nuclear structure); Benefits to society (at least two); Costs, risks or limitations (at least two: money, access, environment, safety, privacy); A Canadian connection (a scientist, company, hospital or facility); Your evaluation: is the benefit worth the cost? Give a reason.
  3. Share it with a family member and ask them one question they still have about it.

What to look for: a strong report card links the technology to a specific concept (for example, "MRI uses the spin of hydrogen nuclei"), gives balanced benefits and costs, cites sources properly and ends with a justified opinion, not just "it is good".

Your turn

1

What property of hydrogen nuclei does MRI use?

2

Give one benefit and one drawback of MRI compared with X-ray imaging.

3

What does IR spectroscopy detect in a molecule?

4

Which Canadian scientist developed VSEPR theory with Ronald Nyholm?

5

For what did Gerhard Herzberg win the 1971 Nobel Prize in Chemistry?

6

How does X-ray crystallography reveal the structure of a molecule?

7

Name two careers that use spectroscopy.

More practice: warm-up

1

What kind of radiation does an MRI scanner use to tip the nuclei?

2

At which university did Rutherford do his Nobel-winning work on radioactivity?

3

Which kind of spectroscopy sorts ions by mass-to-charge ratio?

4

Where is the Canadian Light Source?

5

What absorbs near 1700 cm⁻¹ in an IR spectrum?

More practice: on your own

1

Explain how the greenhouse effect is related to IR spectroscopy.

2

Why is a superconducting magnet useful in MRI, and what environmental issue does it raise?

3

Describe Donna Strickland's contribution and one application.

4

A spectrum shows a broad absorption from 3200 to 3550 cm⁻¹. What functional group is probably present?

5

Give one benefit and one risk of nuclear power in Ontario.

Challenge

1

An MRI scanner at 1.5 T uses radio waves of about 64 MHz to tip hydrogen nuclei. Calculate the energy of one such photon and compare it with a 656 nm visible photon (3.03 × 10⁻¹⁹ J).

2

Name one Canadian scientist from this lesson whose work explains molecular SHAPES and one whose work studies the structure of SOLIDS, and describe each contribution in a sentence.

3

Write a short argument (4 to 5 sentences) for or against this claim: "Governments should fund basic research such as Herzberg's spectroscopy even when it has no obvious use." Use an example from this lesson.

Check your understanding

Quiz

1.

Why is MRI considered safer than CT scanning for repeated imaging?

2.

What does an absorption near 3200 to 3600 cm⁻¹ in an IR spectrum usually indicate?

3.

Which Canadian scientist won the 1971 Nobel Prize in Chemistry for molecular spectroscopy?

4.

X-ray crystallography determines molecular structure using:

5.

Which is an environmental concern associated with MRI scanners?

6.

Which pair is correctly matched?

For parents and teachers

Big idea (C1.1, C3.5): technologies such as spectroscopy and MRI apply the ideas of this unit (quantized energy levels, spin, bond vibrations), and their benefits must be weighed against costs, access and environmental effects. Canadian scientists such as Rutherford (at McGill), Brooks, Herzberg, Gillespie, Bader, Polanyi, Brockhouse and Strickland made major contributions.

How to help: the report card is a good chance to discuss reliable sources: who wrote it, when, and why. If anyone in the family has had an MRI, their experience (noise, time, screening for metal) makes a great discussion starter.

Common difficulties:

  • Vague benefits ("it helps people"). Push for specifics: what does it detect, and why is that useful?
  • Confusing MRI (magnetic fields and radio waves) with CT (X-rays).
  • Mixing up which scientist did what; the timeline helps.