C. Evolution · EvolutionChance and Movement: Genetic Drift, Bottlenecks, Founders and Gene Flow
C3.4 C2.1 C2.2 A1.13About 70 minutes
Learning goals- I can calculate allele frequencies in a population.
- I can explain genetic drift and why it has the biggest effect in small populations.
- I can describe the bottleneck effect and the founder effect with examples.
- I can explain how gene flow affects the genetic makeup of populations.
- I can compare drift, gene flow and natural selection as mechanisms of evolution.
Words to know
allele frequency
The fraction of all copies of a gene in a population that are one particular allele (a number from 0 to 1).
genetic drift
Random changes in allele frequencies from one generation to the next, caused by chance.
bottleneck effect
Genetic drift that happens when a population is suddenly reduced to a few individuals, so much genetic variation is lost.
founder effect
Genetic drift that happens when a few individuals start a new, isolated population.
fixation
When an allele reaches a frequency of 1 (100%): it is the only allele left for that gene.
gene flow
Movement of alleles between populations when individuals or their gametes (such as pollen) move and breed.
microevolution
Small changes in allele frequencies within a population over generations.
Evolution by luck
Natural selection is not the only way a population's genes can change. Imagine a small population of wildflowers in which a few plants with white flowers happen to be under a fallen tree. The tree crushes them before they make seeds. White flowers were not worse; they were just unlucky. Next year, there are fewer white alleles in the population.
This is genetic drift: evolution by chance. In this lesson you will measure allele frequencies, watch drift in action, and learn how it combines with gene flow to shape populations, especially small ones.
Measuring the gene pool: allele frequency
To see evolution happen, biologists track allele frequencies. Most organisms have two copies of each gene (one from each parent). If a gene has two alleles, A and a:
frequency of A = (number of A alleles) ÷ (total number of alleles)
The frequencies of all the alleles of a gene add up to 1. A change in allele frequency over generations is microevolution. (You will learn more about alleles, genotypes and how they are inherited in the Genetic Processes unit.)
Worked exampleExample 1: Let's calculate allele frequencies
A population of 50 deer mice has these genotypes for a coat-colour gene: 18 DD, 24 Dd and 8 dd. Find the frequency of D and of d.
- Each mouse has 2 alleles, so there are 50 × 2 = 100 alleles in total.
- D alleles: each DD mouse has 2, each Dd mouse has 1. D = 18 × 2 + 24 × 1 = 36 + 24 = 60.
- d alleles: each dd has 2, each Dd has 1. d = 8 × 2 + 24 × 1 = 16 + 24 = 40.
- Frequency of D = 60 ÷ 100 = 0.60; frequency of d = 40 ÷ 100 = 0.40.
- Check: 0.60 + 0.40 = 1.00 ✔
Frequency of D = 0.60, frequency of d = 0.40.
Genetic drift: chance changes
In every generation, which individuals happen to reproduce, and which of each parent's alleles happen to end up in its offspring, involves chance. Like flipping a coin, the results can wander away from what you would expect.
- In a large population, chance effects mostly cancel out (flip a coin 1000 times and you get close to 50% heads), so allele frequencies change little by drift.
- In a small population, chance has big effects (flip 10 times and you could easily get 7 or 8 heads). Allele frequencies can swing widely, and an allele can be lost completely (frequency 0) or become fixed (frequency 1) in just a few generations.
Drift is random. Unlike natural selection, it does not make a population better adapted. It can even remove helpful alleles. Drift reduces genetic variation, which makes small populations less able to adapt to future changes.
A computer simulation of genetic drift, starting every population at an allele frequency of 0.5 (random numbers, no selection). In small populations (solid lines) the frequency swings widely; one allele was lost (0) and another fixed (1) within 30 generations. In large populations (dashed) it stays near 0.5.The bottleneck effect
A bottleneck happens when a disaster, disease, or over-hunting suddenly reduces a population to a small number of survivors. The survivors carry only a random sample of the original alleles. Even if the population later grows large again, the lost variation does not come back (except slowly, by new mutations).
- Northern elephant seals were hunted for their oil until, by the 1890s, probably fewer than 100 were left (some estimates say about 20). Protected since then, they have recovered to well over 100 000, but they have very low genetic variation.
- Cheetahs have unusually low genetic variation, which scientists think is the result of one or more ancient bottlenecks.
Low variation can make a species more vulnerable to new diseases or environmental changes, since few individuals may carry alleles that help.
The bottleneck effect. Only a few individuals survive a disaster, carrying a random sample of alleles. When the population recovers, some alleles are gone and others are much more or less common than before.The founder effect
The founder effect happens when a few individuals leave a large population and start a new, isolated population, for example on an island, or a small human community that marries mostly within itself. The founders' alleles are a random sample, so the new population can have very different allele frequencies from the original.
- Some isolated human communities have high frequencies of otherwise rare inherited conditions because one or a few founders happened to carry the allele. For example, certain inherited disorders are more common in the Saguenay–Lac-Saint-Jean region of Quebec, than elsewhere. The region was settled in the 1800s largely by families from nearby Charlevoix, so much of today's population descends from a relatively small number of founders.
- Many island species descend from a few founders that arrived by flying, swimming or drifting on floating vegetation, like the ancestors of Darwin's finches.
Worked exampleExample 2: Let's model a founder event
A large mainland population of beetles has allele frequencies of 0.5 green (G) and 0.5 brown (g). A storm carries 4 beetles to an island: their genotypes are GG, GG, Gg and GG. Find the allele frequencies of the island population and explain the change.
- Total alleles = 4 beetles × 2 = 8.
- G alleles = 2 + 2 + 1 + 2 = 7. g alleles = 1.
- Frequency of G = 7 ÷ 8 = 0.875; frequency of g = 1 ÷ 8 = 0.125.
- The change from 0.5 to 0.875 happened by chance (which beetles the storm carried), not because green is better. This is the founder effect, a form of genetic drift. With only one g allele, the island population could easily lose it entirely in a few generations.
G = 0.875 and g = 0.125 on the island, a big change caused by chance: the founder effect.
Gene flow
Gene flow is the movement of alleles between populations, when individuals migrate and breed, or when gametes travel (pollen blown by wind or carried by bees).
- Gene flow adds variation to a population (alleles new to that population can arrive).
- Gene flow makes neighbouring populations more similar to each other. It works against the differences that selection and drift create in separate populations.
- When gene flow between two populations stops, they can evolve independently. That is an important step toward forming new species (the next lesson).
Human activity changes gene flow. Highways and dams can cut gene flow between populations of turtles, salamanders or fish; wildlife crossings and fish ladders help restore it. Pollen from crops can carry alleles into wild relatives growing nearby.
| Mechanism | Random or not? | Effect on variation within a population | Makes population better adapted? |
|---|
| Natural selection | Not random (depends on traits) | Usually reduces it | Yes |
| Genetic drift | Random | Reduces it (alleles lost) | No |
| Gene flow | Depends on movement | Usually increases it | Not necessarily |
| Mutation | Random | Increases it (new alleles) | Not by itself |
Comparing mechanisms that change allele frequencies.Just for funGenetic drift in one sentence: sometimes the fittest individual in the population gets squashed by a falling tree. Evolution isn't always fair. Sometimes it's just random.
Hands-on activityDrift with paper slips
You need: 10 small slips of paper, a pen, a cup, and a sheet for recording.
Model: a tiny population of 5 plants has 10 alleles of a flower-colour gene. Start with 5 slips marked P (purple) and 5 marked p (white): frequency of P = 0.5.
- Make the next generation: mix the cup, draw one slip without looking, write down its letter, and put it back. Do this 10 times. The 10 letters you wrote are the alleles of the next generation.
- Count the P's and calculate the new frequency of P (number of P ÷ 10).
- Refill the cup so it matches the new generation (for example, 7 P slips and 3 p slips). Repeat steps 1 and 2.
- Run 10 generations (or stop early if one letter disappears). Record the frequency of P each time.
- Repeat the whole run 3 times. Graph all three runs on one set of axes (generation on the x-axis, frequency of P on the y-axis).
- Predict how the graph would look for a population of 500 plants.
What to look for: frequencies that wander up and down by chance; some runs reaching 0 or 1 (loss or fixation, after which nothing can change); three runs ending at different values; the prediction that a large population would stay much closer to 0.5.
Your turn
1A population of 20 plants has genotypes 5 RR, 10 Rr and 5 rr. Find the frequency of R.
Total alleles = 40. R = 5 × 2 + 10 = 20. Frequency of R = 20 ÷ 40 = 0.5.
Random changes in allele frequencies from one generation to the next, caused by chance.
3Why does genetic drift have a bigger effect in small populations?
In small populations, chance events (which individuals reproduce, which alleles are passed on) are not averaged out across many individuals, so frequencies can change a lot and alleles can be lost quickly.
4Describe the bottleneck effect and give an example.
A population is suddenly reduced to a few survivors that carry a random sample of alleles, so variation is lost. Example: northern elephant seals after over-hunting in the 1800s; cheetahs.
5What is the founder effect?
When a few individuals start a new isolated population, its allele frequencies may differ greatly from the original population by chance.
6What is gene flow, and how does it affect two neighbouring populations?
The movement of alleles between populations through migration or gametes. It makes the populations more similar and adds variation.
7Does genetic drift make populations better adapted? Explain.
No. It is random, so it can increase or decrease any allele, even helpful ones. Only natural selection consistently increases adaptation.
More practice: warm-up
1Allele frequencies for one gene with two alleles must add up to what number?
2If the frequency of B is 0.7, what is the frequency of b (two alleles only)?
3What does it mean if an allele is fixed?
Its frequency is 1: it is the only allele of that gene in the population.
4Name one structure people build to restore gene flow for wildlife.
Wildlife crossings (over or under highways) or fish ladders at dams.
5Name the two special cases of genetic drift from this lesson.
The bottleneck effect and the founder effect.
More practice: on your own
1A population of 200 frogs has genotypes 98 SS, 84 Ss and 18 ss. Calculate the frequencies of S and s.
Total alleles = 400. S = 98 × 2 + 84 = 280 → 0.70. s = 18 × 2 + 84 = 120 → 0.30. (Check: 0.70 + 0.30 = 1.)
2Why might a species that went through a bottleneck be at greater risk from a new disease?
With low genetic variation, it is less likely that any individuals carry alleles that give resistance. If the disease kills most individuals, few or none survive to rebuild the population.
3Three birds blown to a new island have genotypes Tt, tt and tt. Find the island's allele frequencies. What would likely happen to T in a few generations, and why?
Alleles = 6. T = 1 → 1/6 ≈ 0.17; t = 5 → 5/6 ≈ 0.83. With only one T allele in a tiny population, T could easily be lost by drift (if the Tt bird happens not to pass it on).
4A highway separates a population of salamanders into two halves. Predict what happens to the two halves over many generations, and explain.
Gene flow between the halves stops, so each half evolves independently: drift (especially if each half is small) and any differences in selection make their allele frequencies diverge, and each half may lose variation. A wildlife underpass could restore gene flow.
5Compare how natural selection and genetic drift would change a population of beetles in which green beetles are better camouflaged.
Selection would steadily increase green alleles because green beetles survive and reproduce more. Drift would change frequencies randomly, sometimes increasing brown even though it is worse, especially in a small population. In large populations selection dominates; in very small ones drift can override selection.
Challenge
1A population of 400 wolves has 0.9 frequency of allele A and 0.1 of a. 100 wolves migrate in from another population in which A = 0.5 and a = 0.5. Assuming all wolves breed equally, what is the new frequency of a?
Alleles before: residents 800 (a = 0.1 × 800 = 80); migrants 200 (a = 0.5 × 200 = 100). New a = (80 + 100) ÷ (800 + 200) = 180 ÷ 1000 = 0.18. Gene flow raised the frequency of a from 0.1 to 0.18.
2Explain why conservation biologists sometimes move a few animals between isolated populations of an endangered species (for example, from one wildlife reserve to another).
Isolated small populations lose variation through drift and may suffer from inbreeding (harmful recessive alleles showing up more often). Moving individuals creates gene flow, bringing in new alleles, increasing genetic variation, and helping the population cope with disease and environmental change.
3The Florida panther population fell to a few dozen animals in the 1990s, and many had health problems linked to low genetic variation. In 1995, eight female pumas from Texas were released into the population. Predict the effect and explain which mechanism was used.
This was deliberate gene flow (genetic rescue). The Texas pumas brought new alleles, increasing genetic variation and reducing the effects of inbreeding. Prediction: healthier offspring and population growth. (Studies afterwards reported that the population did increase and many health problems became less common.)
Check your understandingQuiz
1. In a population of 100 individuals, 36 are AA, 48 are Aa and 16 are aa. What is the frequency of A?
3. Genetic drift has the greatest effect in:
4. A few birds colonize a remote island and start a new population. Its allele frequencies differ from the mainland. This is:
5. Northern elephant seals have low genetic variation because of:
6. Which mechanism tends to make neighbouring populations more alike?
7. Which mechanism consistently increases adaptation to the environment?
For parents and teachersBig idea (C3.4): besides natural selection, chance (genetic drift, including bottlenecks and founder effects) and migration (gene flow) change allele frequencies. Calculating allele frequencies builds numeracy (A1.13: answers to two decimal places).
How to help: Do the coin or paper-slip drift activity together; it is quick and surprising. Ask, "What would happen with 500 plants instead of 5?"
Common difficulties:
- Counting alleles. Each individual has two; heterozygotes contribute one of each.
- Thinking drift is a kind of selection. Drift is random with respect to traits.
- Thinking a recovered population has recovered its variation. After a bottleneck, numbers can recover but variation does not (except slowly through mutation).
Sensitivity: founder effects in human communities are presented as a matter of chance ancestry, not as anything about the people themselves.
Sources: northern elephant seal and cheetah bottlenecks, founder effects in Saguenay–Lac-Saint-Jean, and the 1995 Florida panther genetic rescue are documented in genetics and conservation literature. The drift graph is a computer simulation with random numbers.